B. Ballion, N. Mallet, E. Bezard, J. L. Lanciego, F. Gonon et al., Intratelencephalic corticostriatal neurons equally excite striatonigral and striatopallidal neurons and their discharge activity is selectively reduced in experimental parkinsonism, European Journal of Neuroscience, vol.87, issue.9, pp.2313-2321, 2008.
DOI : 10.1152/jn.00519.2001

J. Bertran-gonzalez, D. Hervé, J. A. Girault, and E. Valjent, What is the degree of segregation between striatonigral and striatopallidal projections?, Frontiers in Neuroanatomy, vol.4, 2010.
DOI : 10.3389/fnana.2010.00136

J. P. Bolam, J. J. Hanley, P. A. Booth, and M. D. Bevan, Synaptic organisation of the basal ganglia, Journal of Anatomy, vol.196, issue.4, 2000.
DOI : 10.1046/j.1469-7580.2000.19640527.x

J. R. Crittenden and A. M. Graybiel, Basal Ganglia Disorders Associated with Imbalances in the Striatal Striosome and Matrix Compartments, Frontiers in Neuroanatomy, vol.5, 2011.
DOI : 10.3389/fnana.2011.00059

M. I. Davis and H. L. Puhl, Nr4a1-eGFP Is a Marker of Striosome-Matrix Architecture, Development and Activity in the Extended Striatum, PLoS ONE, vol.76, issue.1, 2011.
DOI : 10.1371/journal.pone.0016619.s002

P. J. Diggle, Statistical Analysis of Spatial Point Patterns, 2003.

P. F. Durieux, B. Bearzatto, S. Guiducci, T. Buch, A. Waisman et al., D2R striatopallidal neurons inhibit both locomotor and drug reward processes, Nature Neuroscience, vol.47, issue.4, pp.393-395, 2009.
DOI : 10.1038/nn.2286

URL : https://dipot.ulb.ac.be/dspace/bitstream/2013/50721/1/NatureNeuro2009DTR.pdf

P. F. Durieux, S. N. Schiffmann, and A. De-kerchove-d-'exaerde, Differential regulation of motor control and response to dopaminergic drugs by D1R and D2R neurons in distinct dorsal striatum subregions, The EMBO Journal, vol.12, issue.3, pp.640-653, 2011.
DOI : 10.1038/nn.2261

S. J. Eglen, P. J. Diggle, T. , J. B. Eglen, S. J. Wong et al., Homotypic constraints dominate positioning of on- and off-center beta retinal ganglion cells, Visual Neuroscience, vol.13, issue.2, pp.859-871, 2005.
DOI : 10.1017/S0952523800007094

A. Frazer, Norepinephrine involvement in antidepressant action, J. Clin. Psychiatry, vol.61, pp.25-30, 2000.

R. T. Fremeau, . Jr, S. Voglmaier, R. P. Seal, and R. H. Edwards, VGLUTs define subsets of excitatory neurons and suggest novel roles for glutamate, Trends in Neurosciences, vol.27, issue.2, pp.98-103, 2004.
DOI : 10.1016/j.tins.2003.11.005

F. Fulceri, F. Biagioni, P. Lenzi, A. Falleni, M. Gesi et al., Nigrostriatal Damage with 6-OHDA: Validation of Routinely Applied Procedures, Annals of the New York Academy of Sciences, vol.648, issue.1, pp.344-348, 2006.
DOI : 10.1016/S0006-8993(03)02531-9

G. Gangarossa, J. Perroy, and E. Valjent, Combinatorial topography and cell-type specific regulation of the ERK pathway by dopaminergic agonists in the mouse striatum, Brain Structure and Function, vol.30, issue.Suppl 1, pp.405-419, 2013.
DOI : 10.1038/sj.npp.1300613

G. Gangarossa, J. Espallergues, A. De-kerchove-d-'exaerde, S. Mestikawy, C. R. Gerfen et al., Distribution and compartmental organization of GABAergic medium-sized spiny neurons in the mouse nucleus accumbens, Frontiers in Neural Circuits, vol.7, p.22, 2013.
DOI : 10.3389/fncir.2013.00022

URL : https://hal.archives-ouvertes.fr/hal-01578440

C. R. Gerfen, The neostriatal mosaic: striatal patch-matrix organization is related to cortical lamination, Science, vol.246, issue.4928, pp.385-388, 1989.
DOI : 10.1126/science.2799392

C. R. Gerfen, T. M. Engber, L. C. Mahan, Z. Susel, T. N. Chase et al., D1 and D2 dopamine receptor-regulated gene expression of striatonigral and striatopallidal neurons, Science, vol.250, issue.4986, pp.1429-1432, 1990.
DOI : 10.1126/science.2147780

C. R. Gerfen and D. J. Surmeier, Modulation of Striatal Projection Systems by Dopamine, Annual Review of Neuroscience, vol.34, issue.1, 2011.
DOI : 10.1146/annurev-neuro-061010-113641

C. R. Gerfen, Y. , and W. S. , Distribution of striatonigral and striatopallidal peptidergic neurons in both patch and matrix compartments: an in situ hybridization histochemistry and fluorescent retrograde tracing study, Brain Research, vol.460, issue.1, pp.161-167, 1988.
DOI : 10.1016/0006-8993(88)91217-6

A. H. Gittis and A. C. Kreitzer, Striatal microcircuitry and movement disorders, Trends in Neurosciences, vol.35, issue.9, pp.557-564, 2012.
DOI : 10.1016/j.tins.2012.06.008

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3432144

S. Gong, M. L. Doughty, C. R. Harbaugh, A. Cummins, M. E. Hatten et al., Targeting Cre Recombinase to Specific Neuron Populations with Bacterial Artificial Chromosome Constructs, Journal of Neuroscience, vol.27, issue.37, 2007.
DOI : 10.1523/JNEUROSCI.2707-07.2007

URL : http://www.jneurosci.org/content/jneuro/27/37/9817.full.pdf

A. M. Graybiel, Network-level neuroplasticity in cortico-basal ganglia pathways, Parkinsonism & Related Disorders, vol.10, issue.5, pp.293-296, 2004.
DOI : 10.1016/j.parkreldis.2004.03.007

URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.597.5823

A. M. Graybiel and M. F. Chesselet, Compartmental distribution of striatal cell bodies expressing [Met]enkephalin-like immunoreactivity., Proc. Natl. Acad, 1984.
DOI : 10.1073/pnas.81.24.7980

A. Groh, H. S. Meyer, E. F. Schmidt, N. Heintz, B. Skamann et al., Cell-Type Specific Properties of Pyramidal Neurons in Neocortex Underlying a Layout that Is Modifiable Depending on the Cortical Area, Cerebral Cortex, vol.20, issue.4, pp.826-836, 2006.
DOI : 10.1093/cercor/bhp152

K. Hansson, M. Jafari-mamaghani, and P. Krieger, RipleyGUI: software for analyzing spatial patterns in 3D cell distributions, Frontiers in Neuroinformatics, vol.7, 2013.
DOI : 10.3389/fninf.2013.00005

URL : http://doi.org/10.3389/fninf.2013.00005

C. D. Hardman, J. M. Henderson, D. I. Finkelstein, M. K. Horne, G. Paxinos et al., Comparison of the basal ganglia in rats, marmosets, macaques, baboons, and humans: volume and neuronal number for the output, internal relay, and striatal modulating nuclei, 2002.

M. Heiman, A. Schaefer, S. Gong, J. D. Peterson, M. Day et al., A Translational Profiling Approach for the Molecular Characterization of CNS Cell Types, Cell, vol.135, issue.4, pp.738-748, 2008.
DOI : 10.1016/j.cell.2008.10.028

M. Herkenham, C. B. Pert, C. Le-moine, J. C. Corvol, L. Belluscio et al., Mosaic distribution of opiate receptors, parafascicular projections and acetylcholinesterase in rat striatum, Nature, vol.39, issue.5814, pp.415-418, 1981.
DOI : 10.1007/BF00238352

M. Jafari-mamaghani, M. Andersson, and P. Krieger, Spatial point pattern analysis of neurons using Ripley's K-function in 3D, Frontiers in Neuroinformatics, vol.4, 2010.
DOI : 10.3389/fninf.2010.00009

Y. Kawaguchi, Physiological, morphological, and histochemical characterization of three classes of interneurons in rat neostriatum, 1993.

Y. Kawaguchi, Neostriatal cell subtypes and their functional roles, Neuroscience Research, vol.27, issue.1, pp.1-8, 1997.
DOI : 10.1016/S0168-0102(96)01134-0

Y. Kawaguchi, C. J. Wilson, and P. C. Emson, Projection subtypes of rat neostriatal matrix cells revealed by intracellular injection of biocytin, J. Neurosci, vol.10, pp.3421-3438, 1990.

Y. Koshimizu, S. X. Wu, T. Unzai, H. Hioki, T. Sonomura et al., Paucity of enkephalin production in neostriatal striosomal neurons: analysis with preproenkephalin-green fluorescent protein transgenic mice, European Journal of Neuroscience, vol.266, issue.10, 2008.
DOI : 10.1111/j.1460-9568.2008.06502.x

J. N. Kravitz, A. V. Freeze, B. S. Parker, P. R. Kay, K. Thwin et al., Regulation of parkinsonian motor behaviours by optogenetic control of basal ganglia circuitry Computer visualization of threedimensional image data using IMOD, Nature J. R. J. Struct. Biol, vol.28, issue.116, pp.2053-2064, 1996.

A. J. Lanca, S. Boyd, B. E. Kolb, and D. Van-der-kooy, The development of a patchy organization of the rat striatum, Brain Res, vol.392, pp.1-10, 1986.

W. Lei, Y. Jiao, N. Del-mar, and A. Reiner, Evidence for Differential Cortical Input to Direct Pathway versus Indirect Pathway Striatal Projection Neurons in Rats, Journal of Neuroscience, vol.24, issue.38, 2004.
DOI : 10.1523/JNEUROSCI.1990-04.2004

M. Levesque, A. Bedard, M. Cossette, and A. Parent, Novel aspects of the chemical anatomy of the striatum and its efferents projections, Journal of Chemical Neuroanatomy, vol.26, issue.4, pp.271-281, 2003.
DOI : 10.1016/j.jchemneu.2003.07.001

F. C. Liu and A. M. Graybiel, Heterogeneous devel- opment of calbindin-D28K expression in the striatal matrix, 1992.

M. Matamales, J. Bertran-gonzalez, L. Salomon, B. Degos, J. M. Deniau et al., Striatal Medium-Sized Spiny Neurons: Identification by Nuclear Staining and Study of Neuronal Subpopulations in BAC Transgenic Mice, PLoS ONE, vol.22, issue.3, 2009.
DOI : 10.1371/journal.pone.0004770.s002

G. Miyoshi, J. Hjerling-leffler, T. Karayannis, V. H. Sousa, S. J. Butt et al., Genetic Fate Mapping Reveals That the Caudal Ganglionic Eminence Produces a Large and Diverse Population of Superficial Cortical Interneurons, Journal of Neuroscience, vol.30, issue.5, pp.1582-1594, 2010.
DOI : 10.1523/JNEUROSCI.4515-09.2010

S. M. Nicola, The nucleus accumbens as part of a basal ganglia action selection circuit, Psychopharmacology, vol.117, issue.Pt 1B, pp.521-550, 2007.
DOI : 10.1615/CritRevNeurobiol.v10.i3-4.30

A. Reiner, N. M. Hart, W. Lei, and Y. Deng, Corticostriatal projection neurons ??? dichotomous types and dichotomous functions, Frontiers in Neuroanatomy, vol.4, 2010.
DOI : 10.3389/fnana.2010.00142

URL : http://doi.org/10.3389/fnana.2010.00142

A. Reiner, Y. Jiao, N. Del-mar, A. V. Laverghetta, and W. L. Lei, Differential morphology of pyramidal tract-type and intratelencephalically projecting-type corticostriatal neurons and their intrastriatal terminals in rats, The Journal of Comparative Neurology, vol.87, issue.4, pp.420-440, 2003.
DOI : 10.1515/REVNEURO.2000.11.2-3.159

B. D. Ripley, Statistical Interference for Spatial Processes, 1988.

W. Sako, R. Morigaki, S. Nagahiro, R. Kaji, and S. Goto, Olfactory type G-protein ?? subunit in striosome-matrix dopamine systems in adult mice, Neuroscience, vol.170, issue.2, pp.497-502, 2010.
DOI : 10.1016/j.neuroscience.2010.06.072

S. W. Schoen and A. M. Graybiel, Species-specific patterns of glycoprotein expression in the developing rodent caudoputamen: Association of 5?-nucleotidase activity with dopamine islands and striosomes in rat, but with extrastriosomal matrix in mouse, The Journal of Comparative Neurology, vol.285, issue.4, 1993.
DOI : 10.1042/bj2850345

L. D. Selemon and P. S. Goldman-rakic, Longitudinal topography and interdigitation of corticostriatal projections in the rhesus monkey, 1985.

G. M. Shepherd, Corticostriatal connectivity and its role in disease, Nature Reviews Neuroscience, vol.27, issue.4, pp.278-291, 2013.
DOI : 10.1111/j.1460-9568.2008.06229.x

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4096337

S. Y. Shu, X. Bao, S. Li, D. Niu, Z. Xu et al., A new subdivision of mammalian neostriatum with functional implications to learning and memory, Journal of Neuroscience Research, vol.383, issue.2, pp.242-253, 1999.
DOI : 10.1007/978-1-4757-0145-6_1

S. Y. Shu, J. F. Mcginty, and G. M. Peterson, High density of zinc-containing and dynorphin B- and substance P-immunoreactive terminals in the marginal division of the rat striatum, Brain Research Bulletin, vol.24, issue.2, pp.201-205, 1990.
DOI : 10.1016/0361-9230(90)90206-F

S. Y. Shu, G. R. Penny, and G. M. Peterson, The 'marginal division': a new subdivision in the neostriatum of the rat, J. Chem. Neuroanat, vol.1, pp.147-163, 1988.

S. Srinivas, T. Watanabe, C. S. Lin, C. M. William, Y. Tanabe et al., Cre reporter strains produced by targeted insertion of EYFP and ECFP into the ROSA26 locus, BMC Dev. Biol, pp.1471-213, 2001.

E. Valjent, J. Bertran-gonzalez, D. Hervé, G. Fisone, and J. A. Girault, Looking BAC at striatal signaling: cell-specific analysis in new transgenic mice, Trends in Neurosciences, vol.32, issue.10, pp.538-547, 2009.
DOI : 10.1016/j.tins.2009.06.005

Y. Wu, S. Richard, and A. Parent, The organization of the striatal output system: a single-cell juxtacellular labeling study in the rat, Neuroscience Research, vol.38, issue.1, pp.49-62, 2000.
DOI : 10.1016/S0168-0102(00)00140-1