Electron microscope study of the association between some sponges and bacteria, Journal of Experimental Marine Biology and Ecology, vol.30, issue.3, pp.301-314, 1977. ,
DOI : 10.1016/0022-0981(77)90038-7
Microbial Diversity of Marine Sponges, Prog Mol Subcell Biol, vol.37, pp.59-88, 2003. ,
DOI : 10.1007/978-3-642-55519-0_3
Marine sponges as microbial fermenters, FEMS Microbiology Ecology, vol.55, issue.2, pp.167-177, 2006. ,
DOI : 10.1111/j.1574-6941.2005.00046.x
URL : https://academic.oup.com/femsec/article-pdf/55/2/167/18100192/55-2-167.pdf
Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges, The ISME Journal, vol.12, issue.3, pp.564-576, 2012. ,
DOI : 10.1007/BF02010474
Sponge-specific clusters revisited: a comprehensive phylogeny of sponge-associated microorganisms, Environmental Microbiology, vol.7, issue.2, pp.517-524, 2012. ,
DOI : 10.1007/BF02010474
Partial Carbon and Energy Budgets of the Bacteriosponge Verohgia fistularis (Porifera: Demospongiae) in Barbados, Marine Ecology, vol.130, issue.1, pp.273-293, 1981. ,
DOI : 10.1007/BF00387115
Activity profiles for marine sponge-associated bacteria obtained by 16S rRNA vs 16S rRNA gene comparisons, The ISME Journal, vol.55, issue.4, pp.498-508, 2010. ,
DOI : 10.1038/ismej.2009.143
URL : http://www.nature.com/ismej/journal/v4/n4/pdf/ismej2009143a.pdf
Bacterial community profiles in low microbial abundance sponges, FEMS Microbiology Ecology, vol.83, issue.1, pp.232-241, 2013. ,
DOI : 10.1111/j.1574-6941.2012.01467.x
Temporal molecular and isotopic analysis of active bacterial communities in two New Zealand sponges, FEMS Microbiology Ecology, vol.85, issue.1, pp.10-1111, 2013. ,
DOI : 10.1111/1574-6941.12109
Molecular Evidence for a Uniform Microbial Community in Sponges from Different Oceans, Applied and Environmental Microbiology, vol.68, issue.9, pp.4431-4440, 2002. ,
DOI : 10.1128/AEM.68.9.4431-4440.2002
Metabolites from symbiotic bacteriaThis review is dedicated to Professor Axel Zeeck on the occasion of his 65th birthday., Natural Product Reports, vol.21, issue.4, pp.519-538, 2004. ,
DOI : 10.1039/b310175b
Highlights of marine natural products chemistry (1972???1999), Natural Product Reports, vol.17, issue.1, pp.1-6, 2000. ,
DOI : 10.1039/a909113k
Multimodular biocatalysts for natural product assembly, Naturwissenschaften, vol.88, issue.3, pp.93-101, 2001. ,
DOI : 10.1007/s001140100211
Diversity of polyketide synthase genes from bacteria associated with the marine sponge Pseudoceratina clavata: culture-dependent and culture-independent approaches, Environmental Microbiology, vol.178, issue.8, pp.1460-1470, 2006. ,
DOI : 10.1073/pnas.96.21.11740
Ptilomycalin A: a novel polycyclic guanidine alkaloid of marine origin, Journal of the American Chemical Society, vol.111, issue.24, pp.8925-8926, 1989. ,
DOI : 10.1021/ja00206a029
Polycyclic guanidine-containing compounds from the Mediterranean sponge Crambe crambe: the structure of 13,14,15-isocrambescidin 800 and the absolute stereochemistry of the pentacyclic guanidine moieties of the crambescidins, The Journal of Organic Chemistry, vol.58, issue.18, pp.4805-4808, 1993. ,
DOI : 10.1021/jo00070a012
Crambescidins: new antiviral and cytotoxic compounds from the sponge Crambe crambe, The Journal of Organic Chemistry, vol.56, issue.19, pp.5712-5715, 1991. ,
DOI : 10.1021/jo00019a049
Isolation of crambescidin 800 from Monanchora arbuscula (Porifera), Biochemical Systematics and Ecology, vol.22, issue.6, pp.645-646, 1994. ,
DOI : 10.1016/0305-1978(94)90078-7
-CD4 Dissociation, The Journal of Organic Chemistry, vol.62, issue.6, pp.1814-1819, 1997. ,
DOI : 10.1021/jo962084t
URL : https://hal.archives-ouvertes.fr/hal-00302201
Ptilocaulin and isoptilocaulin, antimicrobial and cytotoxic cyclic guanidines from the Caribbean sponge Ptilocaulis aff. P. spiculifer (Lamarck, 1814), Journal of the American Chemical Society, vol.103, issue.18, pp.5604-5606, 1981. ,
DOI : 10.1021/ja00408a071
Biomimetic synthesis of the pentacyclic nucleus of ptilomycalin A, Journal of the American Chemical Society, vol.116, issue.2, pp.549-557, 1994. ,
DOI : 10.1021/ja00081a015
Channel Blocker Activity of Crambescidin 816, Journal of Natural Products, vol.56, issue.7, pp.1007-1015, 1993. ,
DOI : 10.1021/np50097a004
Antimicrobial activity and surface bacterial film in marine sponges, Journal of Experimental Marine Biology and Ecology, vol.179, issue.2, pp.195-205, 1994. ,
DOI : 10.1016/0022-0981(94)90114-7
Location of toxicity within the Mediterranean sponge Crambe crambe (Demospongiae: Poecilosclerida), Marine Biology, vol.178, issue.4, pp.583-590, 1996. ,
DOI : 10.1007/BF00351039
Associazionia fra Poriferi e alghe in acque superficiali det litorale marino. Ricerca scient 36, pp.277-282, 1966. ,
Spatial distribution of sponge-associated bacteria in the Mediterranean sponge Tethya aurantium, FEMS Microbiology Ecology, vol.59, issue.1, pp.47-63, 2007. ,
DOI : 10.1111/j.1574-6941.2006.00217.x
Coexistence of Bacterial Sulfide Oxidizers, Sulfate Reducers, and Spirochetes in a Gutless Worm (Oligochaeta) from the Peru Margin, Applied and Environmental Microbiology, vol.71, issue.3, pp.1553-1561, 2005. ,
DOI : 10.1128/AEM.71.3.1553-1561.2005
Morphology and ultrastructure of the swimming larvae of Crambe crambe (Demospongiae, Poecilosclerida), Invertebrate Biology, vol.226, issue.4, pp.295-307, 2001. ,
DOI : 10.1007/978-3-642-70892-3_15
Genomic and functional adaptation in surface ocean planktonic prokaryotes, Nature, vol.34, issue.7320, pp.60-66, 2010. ,
DOI : 10.1016/S0022-2836(05)80360-2
URL : http://www.nature.com/nature/journal/v468/n7320/pdf/nature09530.pdf
Accelerated Evolutionary Rate in Sulfur-Oxidizing Endosymbiotic Bacteria Associated with the Mode of Symbiont Transmission, Molecular Biology and Evolution, vol.15, issue.11, pp.1514-1523, 1998. ,
DOI : 10.1093/oxfordjournals.molbev.a025879
Tracing the evolution of gene loss in obligate bacterial symbionts, Current Opinion in Microbiology, vol.6, issue.5, pp.512-518, 2003. ,
DOI : 10.1016/j.mib.2003.08.001
Phylogenetic analysis of ribosomal RNA operons from uncultivated coastal marine bacterioplankton, Environmental Microbiology, vol.63, issue.5, pp.323-331, 2001. ,
DOI : 10.1128/AEM.66.11.4605-4614.2000
Characterization of the unlinked 16S rDNA and 23S-5S rRNA operon of Wolbachia pipientis, a prokaryotic parasite of insect gonads, Gene, vol.165, issue.1, pp.81-86, 1995. ,
DOI : 10.1016/0378-1119(95)00539-I
Conservation of the unique rickettsial rRNA gene arrangement in Anaplasma, IJSEM, vol.52, pp.1405-1409, 2002. ,
Vertical transmission of cyanobacterial symbionts in the marine sponge Chondrilla australiensis (Demospongiae), Hydrobiologia, vol.461, issue.1/3, pp.9-13, 2001. ,
DOI : 10.1023/A:1012792426770
Vertical Transmission of Diverse Microbes in the Tropical Sponge Corticium sp., Applied and Environmental Microbiology, vol.73, issue.2, pp.622-629, 2007. ,
DOI : 10.1128/AEM.01493-06
Molecular Microbial Diversity Survey of Sponge Reproductive Stages and Mechanistic Insights into Vertical Transmission of Microbial Symbionts, Applied and Environmental Microbiology, vol.74, issue.24, pp.7694-7708, 2008. ,
DOI : 10.1128/AEM.00878-08
Sponge-microbial interactions: Ecological implications and bioprospecting avenues, Critical Reviews in Microbiology, vol.68, issue.1, pp.82-90, 2010. ,
DOI : 10.1128/MMBR.68.4.745-770.2004
Investigations on the lectin-producing cells in the sponge Axinella polypoides (Schmidt), Cell and Tissue Research, vol.201, issue.3, pp.487-497, 1979. ,
DOI : 10.1007/BF00237007
), Acta Zoologica, vol.16, issue.Suppl. 28, pp.199-210, 1983. ,
DOI : 10.1007/978-3-0348-5797-0
Functional equivalence and evolutionary convergence in complex communities of microbial sponge symbionts, Proceedings of the National Academy of Sciences, vol.587, issue.17, pp.1878-1887, 2012. ,
DOI : 10.1113/jphysiol.2009.174136
Single-cell genomics reveals the lifestyle of Poribacteria, a candidate phylum symbiotically associated with marine sponges, The ISME Journal, vol.1784, issue.1, pp.61-70, 2011. ,
DOI : 10.1038/nbt1214
Phylogenetic Diversity of Bacteria Associated with the Marine Sponge Rhopaloeides odorabile, Applied and Environmental Microbiology, vol.67, issue.1, pp.434-444, 2001. ,
DOI : 10.1128/AEM.67.1.434-444.2001
Screening of a Fosmid Library of Marine Environmental Genomic DNA Fragments Reveals Four Clones Related to Members of the OrderPlanctomycetales, Appl Environ Microbiol, vol.64, pp.3075-3078, 1998. ,
Denaturing gradient gel electrophoresis (DGGE) in microbial ecology, pp.1-27, 1998. ,
A new DNA sequence assembly program, Nucleic Acids Research, vol.23, issue.24, pp.4992-4999, 1995. ,
DOI : 10.1093/nar/23.24.4992
URL : https://academic.oup.com/nar/article-pdf/23/24/4992/7123392/23-24-4992.pdf
UCHIME improves sensitivity and speed of chimera detection, Bioinformatics, vol.27, issue.16, pp.2194-2200, 2011. ,
DOI : 10.1093/bioinformatics/btr381
Bellerophon: a program to detect chimeric sequences in multiple sequence alignments, Bioinformatics, vol.20, issue.14, pp.2317-2319, 2004. ,
DOI : 10.1093/bioinformatics/bth226
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities, Applied and Environmental Microbiology, vol.75, issue.23, pp.7537-7541, 2009. ,
DOI : 10.1128/AEM.01541-09
URL : http://aem.asm.org/content/75/23/7537.full.pdf
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools, Nucleic Acids Research, vol.41, issue.D1, pp.590-596, 2013. ,
DOI : 10.1093/nar/gks1219
URL : https://academic.oup.com/nar/article-pdf/41/D1/D590/3690367/gks1219.pdf
ARB: a software environment for sequence data, Nucleic Acids Research, vol.32, issue.4, pp.1363-1371, 2004. ,
DOI : 10.1093/nar/gkh293
Phylogeny Inference Package) version 3.6. Distributed by the author, 2005. ,
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space, Systematic Biology, vol.61, issue.3, pp.539-542, 2012. ,
DOI : 10.1093/sysbio/sys029
Polymicrobial Nature of Chronic Diabetic Foot Ulcer Biofilm Infections Determined Using Bacterial Tag Encoded FLX Amplicon Pyrosequencing (bTEFAP), PLoS ONE, vol.188, issue.3, p.3326, 2008. ,
DOI : 10.1371/journal.pone.0003326.t001
Removing Noise From Pyrosequenced Amplicons, BMC Bioinformatics, vol.12, issue.1, p.38, 2011. ,
DOI : 10.1186/1471-2105-12-38
URL : https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/1471-2105-12-38?site=bmcbioinformatics.biomedcentral.com
QIIME allows analysis of high-throughput community sequencing data, Nature Methods, vol.8, issue.5, pp.335-336, 2010. ,
DOI : 10.1038/nmeth.f.303
Search and clustering orders of magnitude faster than BLAST, Bioinformatics, vol.26, issue.19, pp.2460-2461, 2010. ,
DOI : 10.1093/bioinformatics/btq461
URL : https://academic.oup.com/bioinformatics/article-pdf/26/19/2460/16896486/btq461.pdf
Unlabeled Helper Oligonucleotides Increase the In Situ Accessibility to 16S rRNA of Fluorescently Labeled Oligonucleotide Probes, Applied and Environmental Microbiology, vol.66, issue.8, pp.3603-3607, 2000. ,
DOI : 10.1128/AEM.66.8.3603-3607.2000
Cloning and retinal expression of melatonin receptors in the European sea bass, Dicentrarchus labrax, General and Comparative Endocrinology, vol.157, issue.2, pp.186-195, 2008. ,
DOI : 10.1016/j.ygcen.2008.04.008
Fluorescence In Situ Hybridization and Catalyzed Reporter Deposition for the Identification of Marine Bacteria, Applied and Environmental Microbiology, vol.68, issue.6, pp.3094-3101, 2002. ,
DOI : 10.1128/AEM.68.6.3094-3101.2002
Silica deposition in Demosponges: spiculogenesis in Crambe crambe, Cell and Tissue Research, vol.301, issue.2, pp.299-309, 2000. ,
DOI : 10.1007/s004410000234
Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations, Appl Environ Microbiol, vol.56, pp.1919-1925, 1990. ,
Optimizing fluorescent in situ hybridization with rRNA-targeted oligonucleotide probes for flow cytometric identification of microorganisms, Cytometry, vol.137, issue.2, pp.136-143, 1993. ,
DOI : 10.1099/00221287-137-12-2823
Phylogenetic Oligodeoxynucleotide Probes for the Major Subclasses of Proteobacteria: Problems and Solutions, Systematic and Applied Microbiology, vol.15, issue.4, pp.593-600, 1992. ,
DOI : 10.1016/S0723-2020(11)80121-9
Development and application of nucleic acid probes, Nucleic acid techniques in bacterial systematics, pp.205-248, 1991. ,